DMT-2'-OMe-C(Ac)-CE-Phosphoramidite

N4-acetyl-5'-O-(4, 4'-Dimethoxytrityl)-2'-O-methyl-Cytidine-3'-CE-Phosphoramidite
Catalog No. PR3-001
CAS No. 199593-09-4
Purity HPLC≥98.0%
Molecular Formula C42H52N5O9P
Molecular Weight 801.86
Storage Condition -20℃

DMT-2'-OMe-C(Ac)-CE-Phosphoramidite

N4-acetyl-5'-O-(4, 4'-Dimethoxytrityl)-2'-O-methyl-Cytidine-3'-CE-Phosphoramidite
Grade
Amount/Package: 0.25g / 30mL screwed bottle-28
SKU: PR3-001-025A  |  suitable for  MerMade
Collections:  2'-O-Me Phosphoramidites Diagnostics Oligo Synthesis Phosphoramidites Phosphoramidites for Diagnostics Synthesis Blocks
Unit price:
$19.00

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Details

DMT-2'-OMe-C(Ac)-CE-Phosphoramidite is a 2'-OMe phosphoramidite monomer used for solid-phase oligonucleotide synthesis. It contains a 5'-dimethoxytrityl (DMT) protecting group for 5'-hydroxyl protection, an acetyl (Ac) base-protecting group on guanine, a cyanoethyl (CE) protecting group on cytosine, and a 2'-O-methyl (2'-OMe) ribose modification

The 2'-OMe modification improves duplex stability, reduces immunogenicity, and significantly increases resistance to nucleases

Applications

siRNA chemical modification

Applied on siRNA duplexes to improve serum stability, reduce off-target effects, and modulate RISC loading.[1][2]

Enzyme or structural RNA inhibition

Inhibit specific RNAs or enzymes (e.g., telomerase) through binding interference.[4]

Features and Benefits

Delivers high coupling efficiency and consistently strong crude yields
Manufactured to ≥98% purity with tightly controlled impurity specifications
Compatible with standard phosphoramidites under routine solid-phase synthesis conditions
Simplified purification: no special precautions needed against RNase degradation

Other Notes

  • Storage: Store in a dry, inert atmosphere at -20 °C.
  • Coupling: 6 minute coupling time recommended
  • Recommended deprotection: 8 h at 55 °C in concentrated ammonia, or 10 min at 65 °C in AMA (ammonia/methylamine, 1:1 v/v)
  • Compatibility: Can be used alongside modified phosphoramidites (e.g., 2′-OMe, 2′-MOE, Locked-NA) to synthesize chimeric oligonucleotides.

Reference

[1] Chiu, Ya-Lin, and Tariq M. Rana. "siRNA function in RNAi: a chemical modification analysis." Rna 9, no. 9 (2003): 1034-1048. [2] Hu, Bo, Liping Zhong, Yuhua Weng, Ling Peng, Yuanyu Huang, Yongxiang Zhao, and Xing-Jie Liang. "Therapeutic siRNA: state of the art." Signal transduction and targeted therapy 5, no. 1 (2020): 101. [3] Burmeister, P.E., Lewis, S.D., Silva, R.F., Preiss, J.R., Horwitz, L.R., Pendergrast, P.S., McCauley, T.G., Kurz, J.C., Epstein, D.M., Wilson, C. and Keefe, A.D., 2005. Direct in vitro selection of a 2′-O-methyl aptamer to VEGF. Chemistry & biology, 12(1), pp.25-33. [4] Pitts, Anne E., and David R. Corey. "Inhibition of human telomerase by 2′-O-methyl-RNA." Proceedings of the National Academy of Sciences 95, no. 20 (1998): 11549-11554.

Specifications
  • Catalog No.
    PR3-001
  • CAS No.
    199593-09-4
  • SMILES
    CC(C)N(C(C)C)P(OCCC#N)O[C@H]1[C@@H](OC)[C@H](N2C(N=C(NC(C)=O)C=C2)=O)O[C@@H]1COC(C3=CC=C(OC)C=C3)(C4=CC=CC=C4)C5=CC=C(OC)C=C5
  • Molecular Formula
    C42H52N5O9P
  • Molecular Weight
    801.86
  • Appearance
    White powder
  • Purity
    HPLC≥98.0%
  • Storage Condition
    -20℃
  • Moisture Content
    K.F.≤0.20% w/w

Documentation
COA Contact Us

DMT-2'-OMe-C(Ac)-CE-Phosphoramidite is a 2'-OMe phosphoramidite monomer used for solid-phase oligonucleotide synthesis. It contains a 5'-dimethoxytrityl (DMT) protecting group for 5'-hydroxyl protection, an acetyl (Ac) base-protecting group on guanine, a cyanoethyl (CE) protecting group on cytosine, and a 2'-O-methyl (2'-OMe) ribose modification

The 2'-OMe modification improves duplex stability, reduces immunogenicity, and significantly increases resistance to nucleases

Applications

siRNA chemical modification

Applied on siRNA duplexes to improve serum stability, reduce off-target effects, and modulate RISC loading.[1][2]

Enzyme or structural RNA inhibition

Inhibit specific RNAs or enzymes (e.g., telomerase) through binding interference.[4]

Features and Benefits

Delivers high coupling efficiency and consistently strong crude yields
Manufactured to ≥98% purity with tightly controlled impurity specifications
Compatible with standard phosphoramidites under routine solid-phase synthesis conditions
Simplified purification: no special precautions needed against RNase degradation

Other Notes

  • Storage: Store in a dry, inert atmosphere at -20 °C.
  • Coupling: 6 minute coupling time recommended
  • Recommended deprotection: 8 h at 55 °C in concentrated ammonia, or 10 min at 65 °C in AMA (ammonia/methylamine, 1:1 v/v)
  • Compatibility: Can be used alongside modified phosphoramidites (e.g., 2′-OMe, 2′-MOE, Locked-NA) to synthesize chimeric oligonucleotides.

Reference

[1] Chiu, Ya-Lin, and Tariq M. Rana. "siRNA function in RNAi: a chemical modification analysis." Rna 9, no. 9 (2003): 1034-1048. [2] Hu, Bo, Liping Zhong, Yuhua Weng, Ling Peng, Yuanyu Huang, Yongxiang Zhao, and Xing-Jie Liang. "Therapeutic siRNA: state of the art." Signal transduction and targeted therapy 5, no. 1 (2020): 101. [3] Burmeister, P.E., Lewis, S.D., Silva, R.F., Preiss, J.R., Horwitz, L.R., Pendergrast, P.S., McCauley, T.G., Kurz, J.C., Epstein, D.M., Wilson, C. and Keefe, A.D., 2005. Direct in vitro selection of a 2′-O-methyl aptamer to VEGF. Chemistry & biology, 12(1), pp.25-33. [4] Pitts, Anne E., and David R. Corey. "Inhibition of human telomerase by 2′-O-methyl-RNA." Proceedings of the National Academy of Sciences 95, no. 20 (1998): 11549-11554.

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Integrated Supply & Commercial Scale

With 26+ years of expertise, we control a secure supply chain for RNA raw materials and provide reliable GMP-grade oligo synthesis from research to commercial kilogram-scale production.

Proprietary Technology & IP

Our proprietary Chemoenzymatic Ligation Platform combines chemical andenzymatic methods, enabling high-putity, cost-effective, and large-scale production of RNA-based therapeutics.

Rigorous Quality

We implement multiple stringent QC steps, maintain ISO certifications, and ensure >99% batch-to-batch consistency, reducing scale-up and PPQ risks.

Manufacturing Scalability

Hongene operates 1.67 million sq. ft Oligonucleotide Manufacturing Facility, with advanced equipments including multiple OligoPilot™ and OligoProcess™ synthesizers (10-1800 mmol). 48 flexible production lines enable one-stop seamless scaling-up of API production from gram-level to tons and acheive high purity of 98%, meeting NMPA, FDA, and EMA standards.

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